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Mr. Avirup Dutta

M.Sc. in Microbiology from Bangalore University.
 

Current research Interest:

In-silico analysis of the prokaryotic genes.

• Identifying horizontally acquired regions in prokaryotic genomes and their involvement in pathogenesis with Vibrio cholerae as a model organism.

In-silico comparative genomic study of different strains of V. cholerae.

• Development of new in-silico methods of comparing and characterizing proteins.

• Analysis of structure-function relationship proteins.

 

Important Publications:

  • Dutta, A., A. Katarkar, and K. Chaudhuri, In-Silico structural and functional characterization  of a V. cholerae O395 hypothetical protein containing a PDZ1 and an uncommon protease domain. PLoS One, 2013. 8(2): e56725. doi:10.1371/journal.pone.0056725.

  • Chatterjee, A., S. Dutta, S. Mukherjee, N. Mukherjee, A. Dutta, A. Mukherjee, S. Sinha, C.K. Panda, K. Chaudhuri, A.L. Roy, and K. Mukhopadhyay, Potential contribution of SIM2 and ETS2 functional polymorphisms in Down syndrome associated malignancies. BMC Med Genet, 2013. 14: p. 12.

  • Dutta, A., J.K. Kundu, R. Chatterjee, and K. Chaudhuri, In silico comparative study of the genomic islands of Vibrio cholerae MJ1236 with those of Classical and El Tor N16961 strains of Vibrio cholerae. FEMS Microbiol Lett, 2011. 321(1): p. 75-81.

  • Dutta, A. and K. Chaudhuri, Analysis of tRNA composition and folding in psychrophilic, mesophilic and thermophilic genomes: indications for thermal adaptation. FEMS Microbiol Lett, 2010. 305(2): p. 100-8.

​Website designed and maintained by Avirup Dutta and Dr. Keya Chaudhuri​​

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